Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRC | rs12499440 | chr4:169167046 | A/C | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12499520 | chr4:169167259 | A/G | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12499590 | chr4:169167390 | A/G | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12500276 | chr4:169167089 | T/C | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12500298 | chr4:169169627 | G/A | 2.18E-8 | 508 | 37.33 | 38.45 | 3.1 | KM Plot |
KIRC | rs12502198 | chr4:169159244 | C/T | 2.0E-8 | 509 | 37.18 | 39.67 | 3.1 | KM Plot |
KIRC | rs12502879 | chr4:169167048 | G/A | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12502951 | chr4:169167256 | G/A | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12503021 | chr4:169167400 | G/A | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12508282 | chr4:123579255 | G/A | 1.07E-5 | 508 | 37.33 | 38 | 10.92 | KM Plot |
KIRC | rs12509384 | chr4:169170820 | A/C | 1.87E-8 | 509 | 3.1 | 36.75 | 37.42 | KM Plot |
KIRC | rs12510230 | chr4:169162097 | T/C | 2.16E-8 | 508 | 37.18 | 39.23 | 3.1 | KM Plot |
KIRC | rs12510913 | chr4:169167371 | C/T | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12510946 | chr4:169167431 | C/T | 2.09E-8 | 509 | 37.33 | 39.23 | 3.1 | KM Plot |
KIRC | rs12511869 | chr4:169167967 | A/G | 2.09E-8 | 509 | 3.1 | 38.45 | 37.35 | KM Plot |